PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28604
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Nin-like
Protein Properties Length: 310aa    MW: 35545.2 Da    PI: 4.9038
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28604genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.54.3e-26141190352
    RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +s e++skyF++pi++AAk+L+++lT+LK++CR++GI+RWPhRk+ sl
  OIT28604 141 RMLSRETISKYFYMPITQAAKKLNIGLTLLKKRCRELGIRRWPHRKLMSL 190
               57899******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRSQSNFEVM STNQENHQDV FSFPTQLPSL EFSGYSGHHA IDYQYDLSIQ EFDANPFMEF  60
TLDDPLYSSF FSTPVQCLTP GELCSGDLRN GFGLSNELGS GNNQLLLCDK NQEIIMINDH  120
VEEIPKKEKA SRQIEEINST RMLSRETISK YFYMPITQAA KKLNIGLTLL KKRCRELGIR  180
RWPHRKLMSL QTLIKNVKEL EKGGGSGMEQ KLKDVIKLLE EEKKMLEEVP DMELEEKTKR  240
LRQACFKANY KRRKLMSMTE LQASFGSYCN SNPAVGIGYG HREEEEDDDD EEIKSLLADC  300
FSSSSPTLDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-49Nin-like family protein