PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28562
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 305aa    MW: 35536.7 Da    PI: 5.1782
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28562genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM682.6e-21111336128
       NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105
               rF Ptd el+ ++Lkk ++g++l+ e  i+  +iy    Pw++  +   eek  yf s+ +k++++ kr +r+ ++g+Wka+    +++++kg++vg +k+
  OIT28562  11 RFYPTDAELI-YFLKKFLKGESLPSECPIRLGEIYGDrPPWEISDH--PEEKIAYFISPLKKRKESHKRFRRTCANGTWKAQTGGDPIKNSKGTVVGFRKS 108
               9*********.***********9996669999**986478***733..356777***************************9999**************** PP

       NAM 106 Lvfy..kgrapkgektdWvmheyrl 128
                v+   + + +k  k +W+m ey +
  OIT28562 109 YVYRtrSSKGSKQDKINWLMREYYV 133
               ***9443455666799*******75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MSMVSRLPSD RFYPTDAELI YFLKKFLKGE SLPSECPIRL GEIYGDRPPW EISDHPEEKI  60
AYFISPLKKR KESHKRFRRT CANGTWKAQT GGDPIKNSKG TVVGFRKSYV YRTRSSKGSK  120
QDKINWLMRE YYVGDDYFWE NNIPKQDIVL CRIKKNITER NRKNGVNMEE QEVAQVIEAM  180
LREPDQTMKA EYAEQQDNYL RGLNKNSQIL TTYDRGEATL ENHGANTNRV YVMTEEANTA  240
ASRQEEAYGQ LSFPGIHEQY CAEADLNTDN SDFSDLNADN SNFLELTLMN GIEDIVPDDW  300
WYQFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-17NAC family protein