PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT28153

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 398aa MW: 44340.9 Da PI: 8.2758

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT28153	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.8e-50	32	158	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 + pGfrF+Ptdeel+++yLkkk+eg++ + evi+ev+i k+ePwdLp k+v ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ + OIT28153 32 MFPGFRFSPTDEELISYYLKKKLEGSDKCV-EVISEVEIWKHEPWDLPaKSVVQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-GSNII 130 579**********************777.99***********767778899**********************************.99* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g k+tLvf++grapkg++t+W+mhey + OIT28153 131 GKKRTLVFHTGRAPKGQRTHWIMHEYCM 158 **************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEDGHVSGSR NENGTTPRNN NVEISIATAS SMFPGFRFSP TDEELISYYL KKKLEGSDKC 60 VEVISEVEIW KHEPWDLPAK SVVQSDNEWF FFSPRGRKYP NGSQSKRATE SGYWKATGKE 120 RNVKSGSNII GKKRTLVFHT GRAPKGQRTH WIMHEYCMSG NTNYQDSMVV CRLRKNSEFQ 180 LNDTPRNQRN QLAATATATS QSGAGQLGSL ELVTVGDCCC SKEGSSSFYS HSVEQIDSGS 240 ESDKPTKEFS QHDSSGHFKD CDGEEDWFAD IMKDDIIKLD DSSLNAQPIS MVPSRPESSI 300 STHEARVAMS GVAPFQGTAN RRLRLVSEKV VVYPVEGSRM YEATKKNKIG VSTTSSGRWL 360 RNMFSVKTMK QYVMPIFLVA FILLVMLLSM LGVSGHAS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEDGHVSGSR NENGTTPRNN NVEISIATAS SMFPGFRFSP TDEELISYYL KKKLEGSDKC  60
VEVISEVEIW KHEPWDLPAK SVVQSDNEWF FFSPRGRKYP NGSQSKRATE SGYWKATGKE  120
RNVKSGSNII GKKRTLVFHT GRAPKGQRTH WIMHEYCMSG NTNYQDSMVV CRLRKNSEFQ  180
LNDTPRNQRN QLAATATATS QSGAGQLGSL ELVTVGDCCC SKEGSSSFYS HSVEQIDSGS  240
ESDKPTKEFS QHDSSGHFKD CDGEEDWFAD IMKDDIIKLD DSSLNAQPIS MVPSRPESSI  300
STHEARVAMS GVAPFQGTAN RRLRLVSEKV VVYPVEGSRM YEATKKNKIG VSTTSSGRWL  360
RNMFSVKTMK QYVMPIFLVA FILLVMLLSM LGVSGHAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	3e-77	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT28153