PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT27875 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 223aa MW: 25423.5 Da PI: 10.443 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 92.2 | 8.7e-29 | 17 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyWkatgkdkevlsk. 95 lp GfrF+Ptdeel+v+yL +k+ + +l++ +i+e+ d++ + P+dLp+ +++ yfFsk++ ++ k +r ++ sgyWka g+ + +++ OIT27875 17 LPIGFRFRPTDEELLVHYLSRKIFSMPLPA-LIIPEIlDVFVSFPSDLPA--GDLRENRYFFSKANGDINS-KGCSRLISgkdcSGYWKAVGQGQLIVVPi 113 699**************************9.5688888***********3..3345678****99887754.4445532224569************9998 PP NAM 96 .......kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 + + g+kk L fy+ ++++ +t+W+mh+y+l OIT27875 114 sgsavseQ--QqqrllLGMKKALRFYQTTRSECLRTRWIMHQYSL 156 88887651..135677***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 223 aa Download sequence |
MEKQKKGAKP TVGSLNLPIG FRFRPTDEEL LVHYLSRKIF SMPLPALIIP EILDVFVSFP 60 SDLPAGDLRE NRYFFSKANG DINSKGCSRL ISGKDCSGYW KAVGQGQLIV VPISGSAVSE 120 QQQQRLLLGM KKALRFYQTT RSECLRTRWI MHQYSLVTIS SSDQNVNMMQ VGDWSVFRIY 180 QKKLLISKNL RTKSNGFAEQ CNIKTNTRKR PFNEVLKDKE VPI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-32 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT27875 |