PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT27786

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 391aa MW: 44541.1 Da PI: 6.841

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT27786	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.2	2.7e-52	14	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 + pGfrFhPtdeelv +yL++kv++k++++ e ik++diyk++PwdLp + ++ +ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ OIT27786 14 MLPGFRFHPTDEELVGFYLRRKVQHKPISI-ELIKQLDIYKYDPWDLPtELATVGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGSKC 113 579*************************.89***********555566999**********************************956677 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfykgra kg ktdW+mhe+rl OIT27786 114 IGLKKSLVFYKGRAAKGIKTDWMMHEFRL 142 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEERNEKEKM DEVMLPGFRF HPTDEELVGF YLRRKVQHKP ISIELIKQLD IYKYDPWDLP 60 TELATVGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL 120 VFYKGRAAKG IKTDWMMHEF RLPSITDSTA PKRFLDKHIP PNDSWAICRI FKKANSNAHR 180 ALSHSWVSPT VPENTTSDFL TSSHFTNYSN EISLINKTNS PIQFSGCSIN DLQNSSSNMA 240 SFSTLDLPLY KSLNSNYDPI TSYTFSSCTE TSEILPLPKC INMNNNNIDA SSLLLNMSSS 300 IFGDYSIPLP ENIEGSGVHD QETTLKEATH VNNMDHLEEQ WRNVRSIGLL PLNNFPLNMA 360 ADAWKTNLLW DSSPCPSSEL STSYSTNKCY T

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEERNEKEKM DEVMLPGFRF HPTDEELVGF YLRRKVQHKP ISIELIKQLD IYKYDPWDLP  60
TELATVGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL  120
VFYKGRAAKG IKTDWMMHEF RLPSITDSTA PKRFLDKHIP PNDSWAICRI FKKANSNAHR  180
ALSHSWVSPT VPENTTSDFL TSSHFTNYSN EISLINKTNS PIQFSGCSIN DLQNSSSNMA  240
SFSTLDLPLY KSLNSNYDPI TSYTFSSCTE TSEILPLPKC INMNNNNIDA SSLLLNMSSS  300
IFGDYSIPLP ENIEGSGVHD QETTLKEATH VNNMDHLEEQ WRNVRSIGLL PLNNFPLNMA  360
ADAWKTNLLW DSSPCPSSEL STSYSTNKCY T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-111	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT27786