PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27630
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 328aa    MW: 38063.7 Da    PI: 8.5533
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27630genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.12.2e-50351682128
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...... 95 
                pGfrFhPtdeelv++yL++kve+k++++ + ikevdiyk++PwdLp ++v  + kewyfFs r +ky+++ r+nr+t sg+Wkatg dk+v+s+      
  OIT27630  35 LPGFRFHPTDEELVSFYLRRKVEDKRIKM-DLIKEVDIYKHDPWDLPrNTVGDNCKEWYFFSMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSTtttsqs 134
               59***************************.99***************667777788**************************************9776655 PP

       NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                ++e +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  OIT27630 135 tDRECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 168
               55555***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSEKRAEKIE NMELGENIAT ATNIKAEDEE EMMQLPGFRF HPTDEELVSF YLRRKVEDKR  60
IKMDLIKEVD IYKHDPWDLP RNTVGDNCKE WYFFSMRGRK YRNSVRPNRV TGSGFWKATG  120
IDKPVYSTTT TSQSTDRECI GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP NWKTSNQQLP  180
NPKNIIPEAE VWTLCRIFKR TSNYKRFTPD WKQPVIKQSF GDANSKACSL QSETSDNHSI  240
NINFKKMEFP HKNNNAATGE NYQVDQGNTH YQNSQPIITM PQSSITSSNS SFWNTSAEEQ  300
YLFSDGNWDE LKSVVDLAID PRSLLGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-86NAC family protein