PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27508 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 26452.5 Da PI: 4.4927 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34 | 5.2e-11 | 57 | 97 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r RR+r+ +++ Lrel+P + K++ a+iL A++YI+ Lq OIT27508 57 RWRRERVDKRIKALRELIPGC-----DKVDQASILDDAIKYIQALQ 97 99******************9.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MEFNKENDVE KQQDLSQDEG EDEINLATEN GNYTDEMLNY YHSLHNVRES NSRNTTRWRR 60 ERVDKRIKAL RELIPGCDKV DQASILDDAI KYIQALQQLH QITSMRMGLM PQEAYMSQAG 120 MMQMPRMEPT NGIMANQTVI PPFALPTSNS SLQMVPQFQA PVCPQFLQST ACTMPLSPSF 180 FTTPSRTMTQ GCTASNPRGE LLREYEEAID YNNSGQGVQG ESSNSAFDST TEKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 1e-15 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27508 |