PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT27439

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 406aa MW: 46016.8 Da PI: 7.763

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT27439	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.4	6.9e-54	22	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 lppGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp+ +k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s+ +g+l OIT27439 22 LPPGFRFHPTDEELITFYLASKVFNGTFCG-IQIAEVDLNRCEPWELPEVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAtNGALL 121 79***********************877.67***********8888999***********************************9978899 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kktLvfy+grapkgekt+Wvmheyrl OIT27439 122 GMKKTLVFYRGRAPKGEKTKWVMHEYRL 149 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MLSMEEILCE LSREDMNNDK GLPPGFRFHP TDEELITFYL ASKVFNGTFC GIQIAEVDLN 60 RCEPWELPEV AKMGEREWYF FSLRDRKYPT GLRTNRATGA GYWKATGKDR EVYSATNGAL 120 LGMKKTLVFY RGRAPKGEKT KWVMHEYRLD GDFSYRYSSK EEWVICRILH KIGEKKNPIY 180 QGAGQNYGYP TSLKTWPSSS SFLNTAAAAA EAAPNPILAE TPNPKTTTTT HCQESFQISQ 240 NSVQSLHNFY LFHHQENDLM KSIFNPINVS QTNLFPINNN VLSSATSFST PQSTKKYKED 300 INKNSSLSSV LFSNALYSSK KNEKQQVSLM QANTTMKTEA SFSPYSGCYN DQNPRPTNFG 360 MNNSSDWSLV GIEGMYFNGG CTQSQMVLDH MHCPIKITAE SWPLDL

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MLSMEEILCE LSREDMNNDK GLPPGFRFHP TDEELITFYL ASKVFNGTFC GIQIAEVDLN  60
RCEPWELPEV AKMGEREWYF FSLRDRKYPT GLRTNRATGA GYWKATGKDR EVYSATNGAL  120
LGMKKTLVFY RGRAPKGEKT KWVMHEYRLD GDFSYRYSSK EEWVICRILH KIGEKKNPIY  180
QGAGQNYGYP TSLKTWPSSS SFLNTAAAAA EAAPNPILAE TPNPKTTTTT HCQESFQISQ  240
NSVQSLHNFY LFHHQENDLM KSIFNPINVS QTNLFPINNN VLSSATSFST PQSTKKYKED  300
INKNSSLSSV LFSNALYSSK KNEKQQVSLM QANTTMKTEA SFSPYSGCYN DQNPRPTNFG  360
MNNSSDWSLV GIEGMYFNGG CTQSQMVLDH MHCPIKITAE SWPLDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	2e-99	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT27439