PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27216 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Dof | ||||||||
Protein Properties | Length: 250aa MW: 27740.9 Da PI: 7.702 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.6 | 1.3e-38 | 47 | 108 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k++al+cprC+s+ntkfCyynnyslsqPryfCk+C+ryWt+GG+lr +PvGgg+rk+kksss OIT27216 47 KDQALNCPRCNSKNTKFCYYNNYSLSQPRYFCKTCKRYWTEGGSLRSIPVGGGSRKSKKSSS 108 7899******************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MDTAQWPQEI VVKPMEEIIP KNTNTITTIC SSKPSTHIER KIKPHQKDQA LNCPRCNSKN 60 TKFCYYNNYS LSQPRYFCKT CKRYWTEGGS LRSIPVGGGS RKSKKSSSST NSSSSNSMSR 120 ELSKNIVAPV LNPPKMEGSQ DLNLGFSCDF KNISELIQVP NNSFMPMPIS DPNSVYSSLN 180 FSLDYGLGIS GDYENNLQDV QDSTTSGRLL FPFEDLKQVS NTSIDGPEEN RDGESNGYWN 240 AVLGGNGGSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64620.1 | 3e-43 | Dof family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27216 |