PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26849

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Trihelix

Protein Properties

Length: 286aa MW: 32729.1 Da PI: 6.5733

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26849	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.7	1.7e-14	24	114	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++ + +L++a ++ +l+rg l++++W++v++ + + + +r+ +qCk++++ l+kryk +k+ + + + +s++p+f++l+ OIT26849 24 CWTEEATWTLVDAWGRRYIELNRGFLRQTDWQQVADSVnalhgHTAKTRRTDIQCKNRIDTLKKRYKVEKAKIVESNGTLTSSWPFFERLD 114 8************************************999999999***************9999998888788889***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MGEITASSTQ VTAPSRPLPF REDCWTEEAT WTLVDAWGRR YIELNRGFLR QTDWQQVADS 60 VNALHGHTAK TRRTDIQCKN RIDTLKKRYK VEKAKIVESN GTLTSSWPFF ERLDFLIGNS 120 GNKVTTVMVS PLPLPSRSPP MGVPLPSRRS TTTTAAAPVV TPVVLPQKRQ MPVLDDSYFR 180 RNYSAVAAAA AAEGGEEDYD DDDEEDMGMS EEKDGMRRLA KAIERFGEIY ERVEEMKQRQ 240 MVELEKQRMQ FAKDLEVQRM QLFMDTQVQL QKIKYTKRSG SDDIYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	7e-39	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIT26849