PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26754 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 432aa MW: 49307.8 Da PI: 6.1225 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.8 | 0.00035 | 150 | 173 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++ +Lk+H + H OIT26754 150 YICSVCGRKCKTNLDLKKHFKQlH 173 89*****************98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 432 aa Download sequence |
MLMSTTIFSS IHLKTSSFFP TPLPTKHQNL TFSFKPNSPI APIKWHHISS CAAGQEIDME 60 RTNEGLYTAK PKKVVILWDL DNKPPRGPPY EAAMSLKKVA QCFGEVVDMS AYANRHAFIH 120 LPQWVVEQRR ERRHLDVLER KGAVTSSEPY ICSVCGRKCK TNLDLKKHFK QLHERERQKK 180 LSRMRSLKGK KRQKFKERHV DGNYKYIEAA RSLITPKVGY GLAAELRRAG VFVKTVADKP 240 QAADWALKKQ MQHSMTRGID WLFLVSDDSD FCDMLRRAKE ANLGTVVVGD MDRALGRHAD 300 LWIPWNGVEN GEIKEKDLVL KLERRRESWG RSNARFSVSE FNGGISEEGT SVGSLMDDIV 360 EKLELSGARI SAFSEGEEDE DVEELDEEDW LRARLDQPGD DNYDTEDSLL DSEDEEGDYL 420 LDSDDEDLGQ MV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 170 | RRERRHLDVLERKGAVTSSEPYICSVCGRKCKTNLDLKKHFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52010.1 | 1e-162 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26754 |