PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26607

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 275aa MW: 30143.5 Da PI: 9.0124

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26607	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.1	1.9e-38	42	102	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++a++cprC stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rkn++ s OIT26607 42 KDQAVNCPRCTSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNRRCS 102 7899*****************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MDTTQWTQDI GLVTSMAAEI APPNVTCSRP SSTLEKKVRP QKDQAVNCPR CTSTNTKFCY 60 YNNYSLTQPR YFCKTCRRYW TEGGTLRNVP VGGGSRKNRR CSSSSLSSSS SQKLPDSNPN 120 PSLSHQNPNY RINLGNSQDL NLGLPSIIHD HNYFHGVPEF LEFPKMDRGN SGNNQPLSST 180 SSTTPISTMD LLRTGIASTG LTSFISTPTP DINALYTSSF LSGIQESSAK MMLPFRFLNK 240 QLSGTSAEAD NYNLSKGQEN SSAGYWNGML GGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	1e-47	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT26607