PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT26586

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 352aa MW: 40725.6 Da PI: 6.5114

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26586	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.9	4e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +ppGfrFhPtdeelv++yL+kk++++++++ +vik++d+yk+ePwdL++ ++ +ee+ +wyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k+ OIT26586 8 VPPGFRFHPTDEELVDYYLRKKITSRRIDV-DVIKDIDLYKIEPWDLQElcRMGTEEQsDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-KHD 106 69**************************.9***********954555554445**********************************.889 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 l+g++ktLv+ykgrap+g+k+d +mheyrle OIT26586 107 LIGMRKTLVYYKGRAPNGQKSDFIMHEYRLE 137 9**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MMNSFSQVPP GFRFHPTDEE LVDYYLRKKI TSRRIDVDVI KDIDLYKIEP WDLQELCRMG 60 TEEQSDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM RKTLVYYKGR 120 APNGQKSDFI MHEYRLETDP NGAPQEEGWV ICRVFKKKIA AMRMDTSEHG SPIWYDDQLS 180 FMPDNMDSPK PQYPHSNTIT NYNHHYPNNY PNCKKELDNL HYQIPPRQQF LQLPLLETNS 240 KLLAAAPPGI SCSSMPIFGI NVNQEHMHHP TFGNNINRGC INDQVEDQVT DWRVLDKFVA 300 SQLSQEDENN YSNAANARGD DSNLMVKNLD KQELAPENTS TASSSSQIDL WK

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MMNSFSQVPP GFRFHPTDEE LVDYYLRKKI TSRRIDVDVI KDIDLYKIEP WDLQELCRMG  60
TEEQSDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM RKTLVYYKGR  120
APNGQKSDFI MHEYRLETDP NGAPQEEGWV ICRVFKKKIA AMRMDTSEHG SPIWYDDQLS  180
FMPDNMDSPK PQYPHSNTIT NYNHHYPNNY PNCKKELDNL HYQIPPRQQF LQLPLLETNS  240
KLLAAAPPGI SCSSMPIFGI NVNQEHMHHP TFGNNINRGC INDQVEDQVT DWRVLDKFVA  300
SQLSQEDENN YSNAANARGD DSNLMVKNLD KQELAPENTS TASSSSQIDL WK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-110	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT26586