PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26185

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 498aa MW: 55038.7 Da PI: 5.8296

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26185	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.5e-14	310	355	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +K++Ka+ L AveYI++L OIT26185 310 NHVEAERQRREKLNHRFYALRSVVPHV-----TKMDKASLLSDAVEYINEL 355 799*********************8.....8*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MDELMVSSSS SSSSFSIPSL FSQTNQPSST LQQMLQYILK NQTDSWSYAI FWQTSNDDDG 60 RLFLAWGDGH FHGTKVKKGE INGANRASSL ERKNVIKGIQ ALICENGDGV VEDGGDVTDI 120 EWFYVMSLAQ SFSIGDGIPG KSFSTGSFVW LNGAQQLQFC SCERAKEAQV HGIETLVCIP 180 TSNGVLELGS SDLIKENWSL VQQVKSLFSS NQENGPEKTI SFADISLVSC LQEEGQILAN 240 NNNNNHNKNN TSQKPKTGEI FTATAATTLF EDSDHSDSDC QVLVDKPIVE KKTPKKRGRK 300 PGATRETPLN HVEAERQRRE KLNHRFYALR SVVPHVTKMD KASLLSDAVE YINELKTKLD 360 ELELQLNNKS ESKKKLKVES MDSTTLDNQS TTTTTTTTSV DQIRANSNSS SSFGPNNLKL 420 EVEVKILGPD AMIRVQSENV NYPSARLMRA LQDLELHVHH ASISSVNDLM LQDIVVKVPK 480 CLGTENGLKS ALLRSLEQ

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MDELMVSSSS SSSSFSIPSL FSQTNQPSST LQQMLQYILK NQTDSWSYAI FWQTSNDDDG  60
RLFLAWGDGH FHGTKVKKGE INGANRASSL ERKNVIKGIQ ALICENGDGV VEDGGDVTDI  120
EWFYVMSLAQ SFSIGDGIPG KSFSTGSFVW LNGAQQLQFC SCERAKEAQV HGIETLVCIP  180
TSNGVLELGS SDLIKENWSL VQQVKSLFSS NQENGPEKTI SFADISLVSC LQEEGQILAN  240
NNNNNHNKNN TSQKPKTGEI FTATAATTLF EDSDHSDSDC QVLVDKPIVE KKTPKKRGRK  300
PGATRETPLN HVEAERQRRE KLNHRFYALR SVVPHVTKMD KASLLSDAVE YINELKTKLD  360
ELELQLNNKS ESKKKLKVES MDSTTLDNQS TTTTTTTTSV DQIRANSNSS SSFGPNNLKL  420
EVEVKILGPD AMIRVQSENV NYPSARLMRA LQDLELHVHH ASISSVNDLM LQDIVVKVPK  480
CLGTENGLKS ALLRSLEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-71	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIT26185