PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT25877

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 498aa MW: 54019.2 Da PI: 6.5936

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT25877	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.5e-39	154	214	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s OIT25877 154 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKNSA 214 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MRVVKDPEIK LFGKKIALPE NGKILTVTVS GGDSGVGKSV SASDVATAKE SSRGWDRDPC 60 LVDKEASSPD ESDDGSEYEN EKADKDQVTR ELTEDMSEEK DQDQVMKESE NLKSPSESEN 120 KPKTPPIDDE SPTVKSSKTE NDATDSQQKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ 180 PRHFCKSCQR YWTAGGTMRN VPVGAGRRKN KNSASHCHHI MISEALQAAR IDPPNGFHHP 240 MLKPNGTVLS FGPDSPLCES MASVMNLAEK KTPNGIQNGY YKPEHKNPSC IGGENGDDCS 300 SGSSVTTNSM AEGVKNRPPE AVVQTINGFP PVPCLPGVPW PFPYAAVPFP AMNPAAFPMP 360 FCPPPYWNCN VPGPWSIPWL APPSSTANQN GSGSSPNSPL GKHSRDGNLL RPNNPEGQKN 420 SEGSVLVPKT LRIDDPDEAA KSSIWSTLGI NYDSVSRGGL FKGFQPKSSE KDHPATTSPA 480 LQANPVAFSR SLSFQERA

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MRVVKDPEIK LFGKKIALPE NGKILTVTVS GGDSGVGKSV SASDVATAKE SSRGWDRDPC  60
LVDKEASSPD ESDDGSEYEN EKADKDQVTR ELTEDMSEEK DQDQVMKESE NLKSPSESEN  120
KPKTPPIDDE SPTVKSSKTE NDATDSQQKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ  180
PRHFCKSCQR YWTAGGTMRN VPVGAGRRKN KNSASHCHHI MISEALQAAR IDPPNGFHHP  240
MLKPNGTVLS FGPDSPLCES MASVMNLAEK KTPNGIQNGY YKPEHKNPSC IGGENGDDCS  300
SGSSVTTNSM AEGVKNRPPE AVVQTINGFP PVPCLPGVPW PFPYAAVPFP AMNPAAFPMP  360
FCPPPYWNCN VPGPWSIPWL APPSSTANQN GSGSSPNSPL GKHSRDGNLL RPNNPEGQKN  420
SEGSVLVPKT LRIDDPDEAA KSSIWSTLGI NYDSVSRGGL FKGFQPKSSE KDHPATTSPA  480
LQANPVAFSR SLSFQERA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	9e-61	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT25877