PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT25759 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 240aa MW: 27191.4 Da PI: 6.8961 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 104.9 | 4.9e-33 | 54 | 107 | 3 | 57 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 k +YkeClkNhA+s+GghavDGCgEf+p+ ge+g+ ++lkCaAC+CHRnFHR+ + OIT25759 54 KPKYKECLKNHAVSIGGHAVDGCGEFIPA-GEDGSLDSLKCAACNCHRNFHRKIT 107 679*************************9.999*******************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MDFENHQEEE ETEPPPSYDD SLNNSNSTHP TKMPSPTPME LEPLAVVHTW HNNKPKYKEC 60 LKNHAVSIGG HAVDGCGEFI PAGEDGSLDS LKCAACNCHR NFHRKITQPP PTAVEPPPFV 120 NYHLPYYRSL PPPCGYLQYH VAPQQRPLAL PSTSGGGGYR EDQEDMSNLN NSGGGSKKRF 180 RTKFSQEQKE KMQELADKLG WRIQREDEEL VQQLCNETGV RRQVFKVWMH NNKNTLGKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 8e-68 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT25759 |