PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT24857 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 238aa MW: 26562.1 Da PI: 8.8528 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.5 | 2.3e-18 | 100 | 154 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA+kl++ rqV vWFqNrRa+ k OIT24857 100 RKKLRLTKVQSALLEESFKQHSTLNPKQKQHLARKLNVRPRQVEVWFQNRRARTK 154 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 120.6 | 7.9e-39 | 100 | 189 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k q++lLEesF+++++L+p++K++lar+L+++prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en++L kev+eL+ +l OIT24857 100 RKKLRLTKVQSALLEESFKQHSTLNPKQKQHLARKLNVRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENKKLYKEVQELK-AL 189 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGFDDICGTG LALGFGFSST ANNQRSRKPP ADKGGSLSFE PSLTLSLSKD KSADHLSSST 60 YSNASVKRER DIGSEETEVE RVLSYRVSDE DLDDDVSNGR KKLRLTKVQS ALLEESFKQH 120 STLNPKQKQH LARKLNVRPR QVEVWFQNRR ARTKLKQTEV DCEFLKKCCE TLTDENKKLY 180 KEVQELKALK LAQPLYMQLP AAATLTVCPS CERVADAGEK APTKPHFYGP FTSPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 157 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-88 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT24857 |