PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT23925

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 250aa MW: 28460.2 Da PI: 8.8487

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT23925	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	51.4	2.2e-16	61	103	4	46
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 is ++l+++F +++ dAAk+Lgv ++LKr CR y I RWP+ OIT23925 61 GISRSVLEEQFGKKLSDAAKSLGVARSTLKRMCRDYDIYRWPR 103 6999**************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MNLQSKKRGE SILPDLAHQQ RVEEADVADK RKHSVHVEES INSHNCSEKH KRIKRIEKEY 60 GISRSVLEEQ FGKKLSDAAK SLGVARSTLK RMCRDYDIYR WPRSNSANDV CSLSENKPVK 120 RVEKQTGNSS REDLQLPHAS LSNGMDTTAT LTQRKVPMAT FQSDNTMSVK VTYKDVTIRF 180 PLSLSSGKID LETEVEKRLK LVPVGSYSIK YEDEDNDWIA ITCDSDLEYG IHTLRSLGRT 240 TMKMLVEPLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-15	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIT23925