PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT23030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28889.5 Da PI: 8.9905 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.5 | 9.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaev +i+fs++gkl+ey++ OIT23030 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 111.4 | 9.1e-37 | 84 | 175 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++++ s++ e+akLk+++e Lqr+qRh++GedL+sLs+keLq+LeqqL+++lk+iRs+Kn+l++e+i+elqkk k+lqe+n++L+kk++e OIT23030 84 TDHSYPGSWTLEHAKLKARLEVLQRNQRHYMGEDLDSLSMKELQNLEQQLDSALKHIRSRKNQLMHESISELQKKDKALQEQNNQLSKKVKE 175 55666789*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVGLIVFST KGKLFEYATD 60 SCMERILERY ERYSYAERQL VATTDHSYPG SWTLEHAKLK ARLEVLQRNQ RHYMGEDLDS 120 LSMKELQNLE QQLDSALKHI RSRKNQLMHE SISELQKKDK ALQEQNNQLS KKVKEREKEL 180 AQQNQWEQQN QELNSSSFVL QQQLDSPNLG EAYQSTAEEN GEVERGSNSQ QQTANTVMPP 240 WMIRHLNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-103 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT23030 |