PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22217
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 299aa    MW: 33698.2 Da    PI: 5.3054
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22217genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-3078136259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+
  OIT22217  78 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPNMLVVTYSCEHNHP 136
               69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDGRFNNIFL SHEQEDSENS PENSLDSPRS DMFNDNKMMT STSSPKRSRR SIQKRVVSVP  60
IKEVEGSKMK GEISMPPSDS WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRA  120
DPNMLVVTYS CEHNHPWPAS RNNQRTTTTT SCTNNAKTKT KTLASLTATT TIITATNIAV  180
SDFEREKDTS NFESQSEPNS DEKFTNLGES SLISCNEFGW FSDFECTSTT MLESPILTEV  240
EVTDIDTSST LMREEDDSLF ADLGELPECS RVFGRGMMER DEERRRHSLS LSSWCGTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-67WRKY family protein