PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT22171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 259aa MW: 28800.2 Da PI: 9.0531 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.7 | 6.2e-19 | 40 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v+++G ++W++I++++ gR++k+c++rw + OIT22171 40 KGPWSAEEDKILTKLVERYGARNWSLISKYIK-GRSGKSCRLRWCNQ 85 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 53.7 | 4.7e-17 | 94 | 136 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ OIT22171 94 PFSQTEDDTILAAHAKYGNR-WATIARLLP-GRTDNAVKNHWNST 136 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEFLNRCSTS TTSSSCESSS SESSLSGKTP RDGKKSERIK GPWSAEEDKI LTKLVERYGA 60 RNWSLISKYI KGRSGKSCRL RWCNQLSPNV QHRPFSQTED DTILAAHAKY GNRWATIARL 120 LPGRTDNAVK NHWNSTLKRR YQQLLQQQQK QSSVVFSDVK INGSTSGSGP CMDYMNSNES 180 PIRGNFPINN VVTTNCCSEF DDPMTTLSLA PPGMGGDELP EKKTESFPAG FWDVMRDVIA 240 KEVREYVASS FSGASTGFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 1e-56 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT22171 |