PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21913
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Nin-like
Protein Properties Length: 320aa    MW: 37261.1 Da    PI: 6.8043
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21913genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.81.6e-26197246352
    RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
               +++ ledl+kyF+lpi +A+k+L+v+lTvLK++CR++GI+RWPhRkiksl
  OIT21913 197 ARLALEDLAKYFDLPIVEASKSLKVGLTVLKKKCREFGIPRWPHRKIKSL 246
               6899********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MASSQNRTLT ALVIFQNFLY PVMFRSVHVY RTEGGKEEME EREYLFHETS NFEETGFAPV  60
ITLHKFDVSA QFVGIENGVW KCMFVYDSGR HQSTSTNASP EWLSFAENPK MDFIPTLAND  120
LRAISELALN VEFRDSSGRS STEESGGNNI KSNQPDVKRR VPFLDLNSLP YSDSDIEEND  180
QNASENKKRR AATKDIARLA LEDLAKYFDL PIVEASKSLK VGLTVLKKKC REFGIPRWPH  240
RKIKSLDSLI HDLQEEMQRQ QEEDELAAIA VEERKRRIEY ERESIEKKPF MDIQKETKKF  300
RQDIFKRRYK ARVLENQCRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.15e-61Nin-like family protein