PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT21684 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 31953.1 Da PI: 8.6645 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.3 | 6.4e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G g+W++ + g+ R++k+c++rw +yl OIT21684 14 KGAWTKEEDQRLINYIRSHGEGCWRSLPTAAGLQRCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 59.7 | 6.2e-19 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEdel+++++ +lG++ W+ Ia +++ gRt++++k++w+++l OIT21684 67 RGNFTEEEDELIIKLHSLLGNK-WSVIAGRLP-GRTDNEIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDQRLINYIR SHGEGCWRSL PTAAGLQRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS VIAGRLPGRT DNEIKNYWNT HLKRKLISRG 120 IDPQSHRPLN AAATSTPASA VTTTIPTTTP KNICTDFTNS VDQKPNIINQ SNNTTDSSYD 180 ETKCNSGTTT EETKPLEISQ KTSQQLMINL ELSIGLPLHT KTTDHISSAE STASYNFLAA 240 LSPPPTAAVP VTAAAEMVAK TVCLCWQIGF QGGGQSCGKC KTATGFYRYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 2e-91 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT21684 |