PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT21600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 183aa MW: 20690.4 Da PI: 7.6414 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37 | 6e-12 | 17 | 66 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 + E++RR++++ + +L +l+P++ ++s+ ls + Le+A++YIk Lq OIT21600 17 RKTTEKNRRNQMKALYLKLHSLVPHQ--QHSREvLSLPDQLEEAINYIKRLQ 66 5678*********************6..488889*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MEQQCNNPSS SSSKADRKTT EKNRRNQMKA LYLKLHSLVP HQQHSREVLS LPDQLEEAIN 60 YIKRLQIDLE RMRQKKDSLK GGENSSCNST SDRMTGLSLP HIEIHSVDSA LQVVLTTGLD 120 YQFIFTDVIR LLHEEGVHVI NASYTLIGDT IVHSIHSKMG ECEPDQYGAA RISERLKKFV 180 GGC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-38 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT21600 |