PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21576
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 144aa    MW: 16926 Da    PI: 8.2188
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21576genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.22.9e-1881443125
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeek..ewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                GfrF+Ptd+e +  +L + v+g++++ +++  +++d+y k ePw++  +   + + e++  + yf +k +kk + + r +r + ++g+Wk+  +dk+v+ 
  OIT21576   8 EGFRFRPTDSEGL-TFLLRFVAGQEMHNSRFiTTDIDVYgKQEPWEIYdNgvpCGDDEDNssHRYFITKMKKK-S-NARYHRsVGNKGTWKQDAEDKPVHY 105
               7**********99.8999999999988888835677*99456*****74455533333342244555555444.4.4677775888**************9 PP

       NAM  95 k....kgel....vglkktLvfykg..rapkgektdWvmhe 125
               k    k       +g k+ L + ++    ++ +  +W+m+e
  OIT21576 106 KnmgnK--SsvvnIGSKTCLSYKNKmfYPEDQKDGHWLMKE 144
               976541..14566999****9995543455556789***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MEHLKFEEGF RFRPTDSEGL TFLLRFVAGQ EMHNSRFITT DIDVYGKQEP WEIYDNGVPC  60
GDDEDNSSHR YFITKMKKKS NARYHRSVGN KGTWKQDAED KPVHYKNMGN KSSVVNIGSK  120
TCLSYKNKMF YPEDQKDGHW LMKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.17e-10NAC family protein