PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT21531

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB

Protein Properties

Length: 251aa MW: 29060.4 Da PI: 8.3451

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT21531	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +lv +v+++G +W+ +++ g+ R++k+c++rw +yl OIT21531 14 KGTWTPEEDRKLVAYVTKYGCWNWRQLPKYAGLARCGKSCRLRWMNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	58.2	1.9e-18	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eEd++++++++qlG++ W+tIa+ ++ gR+++++k++w++ OIT21531 67 RGNYTKEEDDIILKLHAQLGNR-WSTIAAQLP-GRSDNEIKNHWHT 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MVRTPSYDQN GKKKGTWTPE EDRKLVAYVT KYGCWNWRQL PKYAGLARCG KSCRLRWMNY 60 LRPNIKRGNY TKEEDDIILK LHAQLGNRWS TIAAQLPGRS DNEIKNHWHT SLKKRANYYA 120 SNSSDGESKS INQASGTRRK SVENQNAISP NNCMRSYEIV LESSQWSPKQ SSSEEHQAFQ 180 EEAILMENSG SFWTEPFLVD TSFSSRTDYV VPSIDWELVC PPSPFIGHEF LSSFDLEDYN 240 CQKLETEHPK K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-57	MYB family protein

Link Out ? help Back to Top
Ensembl	OIT21531