PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21336
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 277aa    MW: 31126.6 Da    PI: 8.4744
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21336genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.91.1e-383797262
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
              +++ lkcprC+s+ntkfCyynnyslsqPr+fCk+C+ryWt+GG++rnvPvGgg+rknkk +
  OIT21336 37 QQQPLKCPRCNSSNTKFCYYNNYSLSQPRHFCKGCKRYWTRGGTIRNVPVGGGCRKNKKIK 97
              57899*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MLVGDCEKMV QISSTTNEIW PHQNNESMVM EKPSQDQQQP LKCPRCNSSN TKFCYYNNYS  60
LSQPRHFCKG CKRYWTRGGT IRNVPVGGGC RKNKKIKKPN ITTTNPSHNF HQPQIIDDLS  120
PITSNHHSNP LFYGLPTNPS DLNIQFPRLF NSRVSNTENL ELGFSYGQIQ DVMTTTNSNS  180
HLSNYPILNS NLASLIASNL QQQNFISNHN KFQDLSPYIN GEGGNGIMLK MESGNQNRLD  240
WNNISNNQIN SAHPSLSWAG DYVDPSNIGS NSVSSLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.15e-32Dof family protein