PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21259
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 192aa    MW: 21434.5 Da    PI: 4.9784
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21259genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-193887255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               y+GVr++  +g+WvAeIr+p   + r +r++lg+f t  eAa+a++ a+++l+g
  OIT21259 38 TYRGVRQRT-WGKWVAEIREP---N-RgARIWLGTFNTSVEAARAYDDAARRLYG 87
              69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MAESVDRNNS PISKKSTVGR SRKGCMRGKG GPENALCTYR GVRQRTWGKW VAEIREPNRG  60
ARIWLGTFNT SVEAARAYDD AARRLYGSGA KLNLSETENS SNENFNSGEK IIDGGNENGS  120
SGECSVLEEA SIFKDGNGKY LVWETPAPSL LDEQLSTGFN WSRTNEADTN FSFEEKEFND  180
DYFSPKDFLF HM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.17e-39ERF family protein