PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT21259

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ERF

Protein Properties

Length: 192aa MW: 21434.5 Da PI: 4.9784

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT21259	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.9	6.1e-19	38	87	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r +r++lg+f t eAa+a++ a+++l+g OIT21259 38 TYRGVRQRT-WGKWVAEIREP---N-RgARIWLGTFNTSVEAARAYDDAARRLYG 87 69**999.******8...3.35**********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MAESVDRNNS PISKKSTVGR SRKGCMRGKG GPENALCTYR GVRQRTWGKW VAEIREPNRG 60 ARIWLGTFNT SVEAARAYDD AARRLYGSGA KLNLSETENS SNENFNSGEK IIDGGNENGS 120 SGECSVLEEA SIFKDGNGKY LVWETPAPSL LDEQLSTGFN WSRTNEADTN FSFEEKEFND 180 DYFSPKDFLF HM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18450.1	7e-39	ERF family protein

Link Out ? help Back to Top
Ensembl	OIT21259