PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21245
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 311aa    MW: 34896.3 Da    PI: 4.78
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21245genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH491.1e-154291255
              HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
              r +h+e E+rRR +iN++f+ Lr l+P+     ++K + a+ L ++++YI+ Lq
  OIT21245 42 RSKHSETEQRRRIKINERFQALRNLIPET----DQKRDRASFLLEVIQYIQFLQ 91
              899*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MVRTVKTHHE EDEEDEEEFS SRTPDGSSQK GKSNDGKGNS HRSKHSETEQ RRRIKINERF  60
QALRNLIPET DQKRDRASFL LEVIQYIQFL QEKLQWYEGT HQGWSAEPSK LMPWRSTSGP  120
VEGFVEQSQI IRNGSTHEDN IVINPTLLTS AQNSVEQNLS AAALYTDEPH MEANEAVAFN  180
MPLQCNLFEN ASVQPSQSSP DAEHCASQPQ SLYWPGKQDA IDSDVPSYGR NDQEEVKVDG  240
EEAGISNVYS QRLLSTLNQT LASMGVDLSQ ANVKVQLDIA KCPSSGTTAT TLITPDNYDH  300
SRKRLRTEGS M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-47bHLH family protein