PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT20836 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25789.1 Da PI: 5.4634 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.4e-13 | 74 | 120 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + +rE+ RRd++N++f+eL ++l + +++K++K+ iL Av+ + +L OIT20836 74 KAQREKMRRDKLNDRFQELSSILEPG---KQPKMDKSVILSDAVRMVVQL 120 678**********************9...9**************988776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAETEEDGSN WLIELGLMED LPSLEPNAQW PSTAFSLPNN VSSGLDDSYG NSDSLKDRGS 60 KKRARSGACA SDSKAQREKM RRDKLNDRFQ ELSSILEPGK QPKMDKSVIL SDAVRMVVQL 120 RDEAQKLKES YDNLQEKVNE LKAEKNELRD EKQKLKAEKD KLEQQLKTMN AQPGFLPHPP 180 AMASTFSAPH QVYASKMMPY LGYPGIPMWQ FVPPAAVDTS EDHALRPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 2e-84 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT20836 |