PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT20415 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 184aa MW: 21326.7 Da PI: 10.4759 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.2e-05 | 65 | 85 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C+k F r nL+ H r H OIT20415 65 CEVCNKGFQREQNLQLHRRGH 85 *******************88 PP | |||||||
2 | zf-C2H2 | 16.4 | 2.5e-05 | 140 | 162 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ OIT20415 140 FKCEKCSKKYAVQSDWKAHTKTC 162 89*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MNIQQEVLLQ QQQYSLAPSS SMAQNQAQAA PTKKRRNQPG TAPYPDAEVI ALSPKTLMAT 60 NRFLCEVCNK GFQREQNLQL HRRGHNLPWK LKQKNTKEVV KRKVYLCPEI TCVHHEISRA 120 LGDLTGIKKH YFRKHGEKKF KCEKCSKKYA VQSDWKAHTK TCGTREYRCD CGTLFSRASF 180 RFPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02080.1 | 2e-83 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT20415 |