PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT20265

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB_related

Protein Properties

Length: 526aa MW: 58571.3 Da PI: 4.1926

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT20265	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.3	7.4e-08	262	309	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +W++eE+el+ ++v + W+ a +++ R++++++s+++++ OIT20265 262 KWSEEEEELFHEVVLSNPASlgknFWNHLAIEFP-SRSREELVSYYFNV 309 8***********6654445555******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MVQKRPYGEE ELYEVSSKQP RHEPSCQLVS VLELSRESVA VKAYASGGDK DNSSRINSDA 60 DNKPDSHNVA EALFSSEKET EMGIYGSASN SSWPTSCTSE EDIRPEAPFH ILMSPEYYYF 120 DHPFRAAAHH GEMYSSLLSD PPQKMVPIGP DFQAELPEWG AFCNQDKPYI EGVHETLCPS 180 SQADENKLAG NSIIPMPAME LCADHGENIV ERGGECSCED IGSIRCVRLH IMEAREKLKL 240 ALGEETFFRL GFCDMGEVVA EKWSEEEEEL FHEVVLSNPA SLGKNFWNHL AIEFPSRSRE 300 ELVSYYFNVF ILRKRAEQNR FDPLNIDSDN DEWLEIVGDT DQEANMADED EESVVESPAY 360 HNDLSGNGIH EELDKHDEDG GDATWEDYKA VNFGSGKVFT DVPESCPGEL FDSNSSYKLS 420 LQPQDQGLSN KVVKQEVQDG SCTTVAAGVT SESSLGQTDN GKHWANDIAG MGRGTEHDRV 480 FGPCGGKEWD VGYLSCARNE VDLLPTRSMI EEVFGDGAWI YKSRDG

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MVQKRPYGEE ELYEVSSKQP RHEPSCQLVS VLELSRESVA VKAYASGGDK DNSSRINSDA  60
DNKPDSHNVA EALFSSEKET EMGIYGSASN SSWPTSCTSE EDIRPEAPFH ILMSPEYYYF  120
DHPFRAAAHH GEMYSSLLSD PPQKMVPIGP DFQAELPEWG AFCNQDKPYI EGVHETLCPS  180
SQADENKLAG NSIIPMPAME LCADHGENIV ERGGECSCED IGSIRCVRLH IMEAREKLKL  240
ALGEETFFRL GFCDMGEVVA EKWSEEEEEL FHEVVLSNPA SLGKNFWNHL AIEFPSRSRE  300
ELVSYYFNVF ILRKRAEQNR FDPLNIDSDN DEWLEIVGDT DQEANMADED EESVVESPAY  360
HNDLSGNGIH EELDKHDEDG GDATWEDYKA VNFGSGKVFT DVPESCPGEL FDSNSSYKLS  420
LQPQDQGLSN KVVKQEVQDG SCTTVAAGVT SESSLGQTDN GKHWANDIAG MGRGTEHDRV  480
FGPCGGKEWD VGYLSCARNE VDLLPTRSMI EEVFGDGAWI YKSRDG

Link Out ? help Back to Top
Ensembl	OIT20265