PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT20127

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 383aa MW: 43542.5 Da PI: 5.8163

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT20127	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 + pGfrFhPtdeelv +yLk+k+++++l++ e ik+vdiyk++PwdLpk + ++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ +++ + OIT20127 14 MLPGFRFHPTDEELVGFYLKRKIQQRSLPI-ELIKQVDIYKFDPWDLPKVACTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSdSTKCI 113 579*************************.89***********8777899************************************955666 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkk+Lvfy+gra +g ktdW+mhe+rl OIT20127 114 GLKKSLVFYRGRAARGIKTDWMMHEFRL 141 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MDNKSDVEKL DEVMLPGFRF HPTDEELVGF YLKRKIQQRS LPIELIKQVD IYKFDPWDLP 60 KVACTGEKEW YFYCPRDRKY RNSSRPNRVT GAGFWKATGT DRPIYSSDST KCIGLKKSLV 120 FYRGRAARGI KTDWMMHEFR LPTTNIESAQ PKKFLDRNFP PNDSWAICRI FKKTNSMANR 180 ALSYSWINPV SEVASPEVFN QSTTVHFGSQ NISSLTETGS LLHLSSNNDL LQQASNVPSY 240 KTINTMASRS SFLSSPSTDN YMFSSPEVSM FFNTSPALIT DDIKTSETID FEGPNQQLNS 300 FSISSSQEMQ RSAGMEDDEA GLRSNQDSTN DNTTQWENIR SIGFPFSLTT SLADEWKPSL 360 SWDSPSCPSE ISTTYDSTNK CYT

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MDNKSDVEKL DEVMLPGFRF HPTDEELVGF YLKRKIQQRS LPIELIKQVD IYKFDPWDLP  60
KVACTGEKEW YFYCPRDRKY RNSSRPNRVT GAGFWKATGT DRPIYSSDST KCIGLKKSLV  120
FYRGRAARGI KTDWMMHEFR LPTTNIESAQ PKKFLDRNFP PNDSWAICRI FKKTNSMANR  180
ALSYSWINPV SEVASPEVFN QSTTVHFGSQ NISSLTETGS LLHLSSNNDL LQQASNVPSY  240
KTINTMASRS SFLSSPSTDN YMFSSPEVSM FFNTSPALIT DDIKTSETID FEGPNQQLNS  300
FSISSSQEMQ RSAGMEDDEA GLRSNQDSTN DNTTQWENIR SIGFPFSLTT SLADEWKPSL  360
SWDSPSCPSE ISTTYDSTNK CYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-104	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT20127