PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT19870 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26450.1 Da PI: 7.8075 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.1 | 2.8e-12 | 56 | 102 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr l+P++ K++Ka+ L +++ +k+L OIT19870 56 KSHSEAERRRRERINAHLATLRNLVPSS-----DKMDKAALLAEVICQVKQL 102 58*************************8.....7**********99999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MNCQISGNLG GFYENEAKGV SQSLVLDSEK GELVKASGRV GKKTGKSEGK SIAALKSHSE 60 AERRRRERIN AHLATLRNLV PSSDKMDKAA LLAEVICQVK QLKETATHVS ESFFIPLDSD 120 EIRVETIAEN AGDGTCLFRA SICCEYRPEL LSDLREVINS LHVNLVKSEI STLGSRVKNI 180 FVFTNVIDGG YANIEVREIL LTSARQAFSS VLDKVSAFPE YSTYPNKRQR ISCFDTSSLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 67 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 3e-36 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT19870 |