PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT19314

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 392aa MW: 43670.4 Da PI: 5.1061

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT19314	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.3	2.7e-31	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lel.eevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWka 85 lp+G++F+P+d el+ eyL++k+ + +++ +e+i+++d i++++P++L +k++ ++++fF + ++y+tgkrk+r+ ++ +W++ OIT19314 55 LPVGVKFDPSDVELL-EYLEEKCGVGNskqHKFiDEFIPTLDvyegICYTHPENLT-GAKKDGSSVHFFYRITNAYSTGKRKRRKisdennlmKEHVRWHK 153 799**********.**877663342221234666665555999**8.666788899**************86888887766999* PP NAM 86 tgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 tgk+k v++ +g ++g+kk++v+y++ + +k ekt+Wvmh+y+l OIT19314 154 TGKTKIVME-NGLQKGCKKVMVLYQNtkKGSKQEKTHWVMHQYHL 197 **99999.999*******6422667788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MGRSWLIDGR GLARKIKNAS APAAHQIKDC GAKRQCPNCH YCIDNNDVSQ EWPGLPVGVK 60 FDPSDVELLE YLEEKCGVGN SKQHKFIDEF IPTLDVYEGI CYTHPENLTG AKKDGSSVHF 120 FYRITNAYST GKRKRRKISD ENNLMKEHVR WHKTGKTKIV MENGLQKGCK KVMVLYQNTK 180 KGSKQEKTHW VMHQYHLGTD EDEKEGEYVV SKIFYQQQKQ SVKANDSSVN EEASAGANQT 240 GPTTPKTVTP NPPRAGETPS CDDFIDDSLS FSPDQEVEVA KEPGQSSDAK VKCEVEYPTC 300 LAGESQGADA NDVDNSLLCD ELLASYLDSF EHNLGSSTEF THNTSHLSQG NGNTTCGISE 360 LDNLELDTPP DFQLADLPFG SQESIFSWLD RQ

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MGRSWLIDGR GLARKIKNAS APAAHQIKDC GAKRQCPNCH YCIDNNDVSQ EWPGLPVGVK  60
FDPSDVELLE YLEEKCGVGN SKQHKFIDEF IPTLDVYEGI CYTHPENLTG AKKDGSSVHF  120
FYRITNAYST GKRKRRKISD ENNLMKEHVR WHKTGKTKIV MENGLQKGCK KVMVLYQNTK  180
KGSKQEKTHW VMHQYHLGTD EDEKEGEYVV SKIFYQQQKQ SVKANDSSVN EEASAGANQT  240
GPTTPKTVTP NPPRAGETPS CDDFIDDSLS FSPDQEVEVA KEPGQSSDAK VKCEVEYPTC  300
LAGESQGADA NDVDNSLLCD ELLASYLDSF EHNLGSSTEF THNTSHLSQG NGNTTCGISE  360
LDNLELDTPP DFQLADLPFG SQESIFSWLD RQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	137	KRKRRK
2	132	158	KRKRRKISDENNLMKEHVRWHKTGKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	2e-95	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT19314