PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT19199 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 335aa MW: 37526.6 Da PI: 9.9263 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.1 | 2.7e-31 | 264 | 321 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ ++p+++++tYegeHnh+ OIT19199 264 DDYSWRKYGQKPIKGSPHPRAYYKCSSVrGCPARKHVERALDEPTMLTVTYEGEHNHS 321 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MAVELMMDYR NTSRNNFTIF NTKLEEKAVV QEAASGLESV EKLLKLLSQT QSQSQQQQKQ 60 GNLSSFLKQE NSPMEIEMVA DAAVTKFKNV ISLLGRTRTG HARFRRAPIT SPPKVNKDFI 120 DSKVYCPTPI QQVPPVAYEL YNHQFFQNPR DGVVEKQELV TKKSINFSYA QDICRSNSFN 180 MSTLTGETES SSFKISNLSS AGKPPLSTSS SFKRKCCSSE NGLSGKCSGS SGRCHCSKRS 240 RKLRLKRVER VPAISMKMSD IPPDDYSWRK YGQKPIKGSP HPRAYYKCSS VRGCPARKHV 300 ERALDEPTML TVTYEGEHNH SLSVAETSSL ILESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 4e-71 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT19199 |