PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT08887 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 156aa MW: 17383.1 Da PI: 10.7386 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 52.2 | 1.1e-16 | 23 | 69 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L++l+P+a K +Ka++L ++++Y+k+Lq OIT08887 23 VHNQSERRRRDRINEKMKALQKLVPNA-----SKTDKASMLDEVIKYLKQLQ 69 5*************************9.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
ENKEEERETK GSNTLRRSRT AAVHNQSERR RRDRINEKMK ALQKLVPNAS KTDKASMLDE 60 VIKYLKQLQA QIQLISSARN MESQMMMQLS LGMQLPHIQM PLLARMGTGV NLDMTSGMLN 120 NMTANLARAA AAAATTPHQS LNAPFIYPTS IATSCP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 33 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00050.1 | 2e-30 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT08887 |