PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08812
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 178aa    MW: 20648.8 Da    PI: 10.3829
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08812genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.42.9e-19131403128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
               +G+rF  t+ el+ ++Lk+ ++g+ l+ e   ++ +diy    Pw++  + ++ eek  y F++ +k++++ +r +r+ ++g+Wk +    ++++ kg++v
  OIT08812  13 MGVRFPRTEAELI-NFLKRFLKGELLPSECPnFQLADIYGDqPPWQIFGASDHpEEKVRYIFTRLKKQKSEHTRVRRTCANGTWKGQTGIFPIKNGKGTVV 112
               7************.9*********977755459999***87368***743333255566**************************88888*****9***** PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
               g ++ + f + +++  ++ dW+m+ey++
  OIT08812 113 GFRRRFKFQTSSKEGEHNKDWLMKEYSV 140
               *********998888899********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MSMVPAARRG CIMGVRFPRT EAELINFLKR FLKGELLPSE CPNFQLADIY GDQPPWQIFG  60
ASDHPEEKVR YIFTRLKKQK SEHTRVRRTC ANGTWKGQTG IFPIKNGKGT VVGFRRRFKF  120
QTSSKEGEHN KDWLMKEYSV GDDFFKENNI PKEDIVVCRI KKNIRAEKNH GVLTTLEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-12NAC family protein