PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08719
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GRAS
Protein Properties Length: 360aa    MW: 41158.7 Da    PI: 6.6207
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08719genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS223.21.3e-68235912374
      GRAS  12 vssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalkl....fse..vsPilkfshltaNqaIlea 105
               v+++++ +a ++L+  ++ as +g+p+qR++ yf+ AL++++ r+  ++  + +   ++ +n ++e ++   l    f +  ++P+ + + +t  qaIl++
  OIT08719   2 VATRKFDRAIKFLSLCNQSASATGTPVQRVVYYFADALQHKIDREIGKMPITREEDIETYSNdVEELVMD--LqpavFAKrpLFPYRQATSFTGIQAILDS 100
               7889999*************************************55544433333222222223333333..23466654449****************** PP

      GRAS 106 vegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfA.eelgvpfefnvlvakrledleleeLrvkpgEalaV 204
               +++++rvH iD+ i+ G +W++++q+La+R+e p  +l+i +vg+    sk+++e +g+rL+ fA e+l+v+f+fn+ v+++l +l++e+++v+ +E++aV
  OIT08719 101 IKTAKRVHLIDLCIKSGSHWATFMQTLADRDECPLkHLKISVVGR----SKKKMEDVGRRLSAFAaETLNVSFSFNT-VVSDLRNLKTESFEVEADEVVAV 196
               *******************************65544*********....9**************73679********.7999******************* PP

      GRAS 205 nlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaer 305
                + + l ++l+ + +++s    +++++k+l+P +vv++e  a++  ++F + f e+l+y+sal d+ e+     ++    +E +++++ i+n+++c+ ++ 
  OIT08719 197 YSDVILWTMLAWPNDMDS----LMEVIKGLNPCIVVLIEGIANTYLPDFIDSFNETLSYFSALTDCSEVL----HKGIPIYEGFYIQKVIRNMITCKSQKN 289
               *********966666666....**********************************************99....89999********************** PP

      GRAS 306 rerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
               + rh +l+ Wr+ + ++ + +  ls+    +a+ll  k +  +  + e +++ lv+ Wk+ p++ vSaW+
  OIT08719 290 VPRHGNLKVWRDLFAKFDMVETDLSHLSLIEASLLFDKSEfRRLCTCELDEKFLVISWKRTPMICVSAWK 359
               ****************************************8888999**********************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
LVATRKFDRA IKFLSLCNQS ASATGTPVQR VVYYFADALQ HKIDREIGKM PITREEDIET  60
YSNDVEELVM DLQPAVFAKR PLFPYRQATS FTGIQAILDS IKTAKRVHLI DLCIKSGSHW  120
ATFMQTLADR DECPLKHLKI SVVGRSKKKM EDVGRRLSAF AAETLNVSFS FNTVVSDLRN  180
LKTESFEVEA DEVVAVYSDV ILWTMLAWPN DMDSLMEVIK GLNPCIVVLI EGIANTYLPD  240
FIDSFNETLS YFSALTDCSE VLHKGIPIYE GFYIQKVIRN MITCKSQKNV PRHGNLKVWR  300
DLFAKFDMVE TDLSHLSLIE ASLLFDKSEF RRLCTCELDE KFLVISWKRT PMICVSAWKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-39GRAS family protein