PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT08626

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NF-YB

Protein Properties

Length: 115aa MW: 13106.6 Da PI: 6.2558

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT08626	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	127.8	4e-40	2	88	11	97
NF-YB 11 anvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 nv+rimk++lP aki+k+aket+qec+sefisfvt+easdk ++e+r+t ng+d++wal++lGf +yve + yl k re+e++k OIT08626 2 HNVGRIMKQILPPTAKICKEAKETIQECASEFISFVTGEASDKRHKENRRTFNGHDICWALSSLGFGNYVEVMLRYLYKLREFERQK 88 69**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 115 aa Download sequence
VHNVGRIMKQ ILPPTAKICK EAKETIQECA SEFISFVTGE ASDKRHKENR RTFNGHDICW 60 ALSSLGFGNY VEVMLRYLYK LREFERQKAN QTKGSNDEAT DEAASESENQ ECTTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	7e-41	NF-YB family protein

Link Out ? help Back to Top
Ensembl	OIT08626