PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08593
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 363aa    MW: 40221.5 Da    PI: 4.8556
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08593genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-102883281055
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  OIT08593 288 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 328
               9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEPVGTILSE GEWSSLSGTC STEEADFMAQ LFGNCPNELP NSSNIRLPNF WTGHDQSSMN  60
VGGLTNQVPM YNSSDETNNS IYVFSQESTD NSGGSGIHFP HFHATLLTND SVEDKMSYPS  120
HQVPPNNVIE ADAIDFLNKE VCNGSMESGE NMPESDLHGK GLQLGREYDQ MQVREQDHKM  180
DSLSESSKKR SRLPTNDVPK NKRSVKPKKN MKSIADDEIG NKENNSNVLH RQSSFSCCSE  240
DESNVSNYDL YGLASSDNSK GVSAPLNSNG KSRASRGSAT DPQSLYARKR RERINERLRI  300
LQSLVPNGTK VDISTMLEEA VQYVKFLQLQ IKLLSSDDLW MYSPIAYNGM DLGLDLKIGI  360
PNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-52bHLH family protein