PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT08506

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 564aa MW: 63926.9 Da PI: 6.6181

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT08506	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28	3.8e-09	482	520	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e++ LA k gLt +qV++WF N R + OIT08506 482 MFQNflHPYPKDAEKQLLAVKSGLTRSQVSNWFINARVR 520 5887779******************************88 PP
2	BELL	73.6	3.3e-24	356	422	4	71
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 + ++kk +L+ ll+ Vd++Y+q+ +++++vis+F+av++l++ +++++Al++iS +++L+++i++ OIT08506 356 DSEAKKKHLVALLQVVDDQYNQCLDEIHMVISAFHAVTELDP-SIHARFALQTISSLYKNLRERISNY 422 6799************************************.9*******************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MAEPYPIIDE NFLHTTSIPI IFPDRVGLNN QNHVMDGQNH IMDGHEIPIP FMLQGEAINS 60 SQDFLSLPNF PRAVDPGAIH SVLPMRNRTK EFSLSTSYPI SNAYTEDQYM EGIPISAVSL 120 ANLLATRNAM PENHENLAPL APLSHPVEGH KTDVLDYPTM LNHSFGSYRN YEFDGVPEIA 180 GTVAGRTGSQ PFQLTHENVN SNTWFSSETA SMSSDSPSGS SSRFSNELSL SLISTQSAVA 240 CGTSIRDQCS DISCSGVTNH AFSQRRFDSE LTSCNSRNLS LNFGSYKPVH LSQFLTGSRY 300 LRMMQEILSE MAHLSLQNHN LVGYRGNGTE YGANTSFTLS SDDLPDEDCR IICEMDSEAK 360 KKHLVALLQV VDDQYNQCLD EIHMVISAFH AVTELDPSIH ARFALQTISS LYKNLRERIS 420 NYILAMGEHF NRGGEKGVEK SFETSFIQKQ WALQQLKRKD HQLWRPQRGL PERSVSVLRA 480 WMFQNFLHPY PKDAEKQLLA VKSGLTRSQV SNWFINARVR LWKPMIEEMY AEMNRRKIRT 540 GNHEDETNNR RNHKIIDNRL FTMK

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MAEPYPIIDE NFLHTTSIPI IFPDRVGLNN QNHVMDGQNH IMDGHEIPIP FMLQGEAINS  60
SQDFLSLPNF PRAVDPGAIH SVLPMRNRTK EFSLSTSYPI SNAYTEDQYM EGIPISAVSL  120
ANLLATRNAM PENHENLAPL APLSHPVEGH KTDVLDYPTM LNHSFGSYRN YEFDGVPEIA  180
GTVAGRTGSQ PFQLTHENVN SNTWFSSETA SMSSDSPSGS SSRFSNELSL SLISTQSAVA  240
CGTSIRDQCS DISCSGVTNH AFSQRRFDSE LTSCNSRNLS LNFGSYKPVH LSQFLTGSRY  300
LRMMQEILSE MAHLSLQNHN LVGYRGNGTE YGANTSFTLS SDDLPDEDCR IICEMDSEAK  360
KKHLVALLQV VDDQYNQCLD EIHMVISAFH AVTELDPSIH ARFALQTISS LYKNLRERIS  420
NYILAMGEHF NRGGEKGVEK SFETSFIQKQ WALQQLKRKD HQLWRPQRGL PERSVSVLRA  480
WMFQNFLHPY PKDAEKQLLA VKSGLTRSQV SNWFINARVR LWKPMIEEMY AEMNRRKIRT  540
GNHEDETNNR RNHKIIDNRL FTMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-104	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT08506