PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08096
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 329aa    MW: 38113.1 Da    PI: 4.8145
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08096genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.61.1e-14151229291
      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
               fY+e+A+  GFsv k++s+k+   +     t++C +   r+ + ++          +  +Cka+l+v ++++g w+v+k++++HnHel p
  OIT08096 151 FYKEHARLRGFSVIKRNSNKK-GGDIARYITYCCDRTRIRKIKFTT----------KSNNCKARLVVVLDDSGCWRVSKVVHDHNHELLP 229
               9***************99997.445567779999999999887666..........7789***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MNSNQENLAV QQNMNPNEHN TNTTTMNINQ DNRFDRVRDK LYRSLGMTSD DSLLNEYEWV  60
DVDSHGSFNN DVHLDDDDEE VDAAVNLDDD DEEADGEYHG EANDDDEHVL GNELELCDVD  120
REMENEFTEE NVVVGPISGM QFRDKDTLFA FYKEHARLRG FSVIKRNSNK KGGDIARYIT  180
YCCDRTRIRK IKFTTKSNNC KARLVVVLDD SGCWRVSKVV HDHNHELLPF VSRLMAGHRS  240
VCDSLKRDLV AHDRSGIRPS KNIRLAEVQR GRPQNLGCTP KDCRNYILKS RNFEMQEGDA  300
QSLLNFFREI QVKDREFFYS FDVDNIGRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-19FAR1 family protein