PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07811
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 333aa    MW: 37425.6 Da    PI: 9.3135
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07811genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.68e-1936129186
  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikegekk....rtsessstcpyfdqle 86 
               +W+++e+ aLi+a+r+++ +l+rg+l++++W+ev++ +  r  g+   ++++qC++k+e+l+kry+ + +++      r+ +  s +++f++++
  OIT07811  36 CWSHDETIALIDAYRDKWYSLSRGNLRANHWQEVADDVaaRCPGVdpPKTAVQCRHKMEKLRKRYRTEIQRAAPyggvRSHRYCSAWVLFKRMD 129
               8************************************976555665589*****************9988876411113455556777777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MATLSSSTQD FSNSPSELPS ANVTVAVSSR RLPPPCWSHD ETIALIDAYR DKWYSLSRGN  60
LRANHWQEVA DDVAARCPGV DPPKTAVQCR HKMEKLRKRY RTEIQRAAPY GGVRSHRYCS  120
AWVLFKRMDA MERGPNAVSS DEEADEDVED YRQNSVKLIG DLYGNNNVNT NNNRSSSFQG  180
VVSNGGGGFR IRIPGMPVAA APMAKPYSRM EDSGVEHPSN FGPGKMFRGD GFVKKADMGK  240
RVAGEGVGPV REKKKEDPMG EMVAAIKMLG DGFVRMERMK MDMARELEEM RMEMEMKRTQ  300
MILESQQRIV EAFAQALSEK NHKKPKRMPT HEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.13e-60Trihelix family protein