PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07716
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 263aa    MW: 29547.4 Da    PI: 6.8271
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07716genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.41.7e-17175209135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C +C + kTp+WR gp g+ktLCnaCG+++++ +l
  OIT07716 175 CMHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 209
               99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDVYGVSAPD LFRIDDLLDF SNDEIFSINS NSSSTTATPD SQHHHHHHHQ PHSDNSSAAT  60
ANYYDALLPN CSDDFTDNLC VPSDDVAELE WLSNFVEDSF SSFPTNSVTG TMNLSSNTTS  120
SFHGRSRSKR SRSTSSWTSS LQNPNTTTTT MKNKEISVHT RERSSSMDDD VPRRCMHCAS  180
EKTPQWRTGP LGPKTLCNAC GVRFKSGRLV PEYRPAASPT FVLTQHSNSH RKVMELRRQK  240
EMIHQQPPPP TEEGMYGHHF RVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125130RSRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.12e-62GATA family protein