PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07681 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 27089.8 Da PI: 9.9391 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.1 | 2.3e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+s rqvtfskRrng+lKKA+EL +LCda+v +iifsstgklye+s+ OIT07681 10 RIDNSSSRQVTFSKRRNGLLKKAKELAILCDAQVGLIIFSSTGKLYEFSN 59 8***********************************************95 PP | |||||||
2 | K-box | 80.2 | 4.9e-27 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++ +++q+e+a L++++++Lq+++R+++Ge+L L++k+Lq+Le++Le+s++ iR+kK+++l+++i+el k +++en +L +k+ OIT07681 81 NPVSELKYWQKEAAMLRQQLQELQQNHRQVMGEQLYGLTIKDLQNLENRLETSIRGIRTKKEQILHDEIQELSWKGSLMHQENLELVEKV 170 5567899*******************************************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGRGKIVIRR IDNSSSRQVT FSKRRNGLLK KAKELAILCD AQVGLIIFSS TGKLYEFSNA 60 SVKSIVERYN KTKDEHHQLH NPVSELKYWQ KEAAMLRQQL QELQQNHRQV MGEQLYGLTI 120 KDLQNLENRL ETSIRGIRTK KEQILHDEIQ ELSWKGSLMH QENLELVEKV NIIQQENVDL 180 YKKAFGTRDA NEVNGNSTTP YYFTISREVH APIHLQLSQP EPHNFARVVS NQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 2e-91 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT07681 |