PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07624 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C3H | ||||||||
Protein Properties | Length: 333aa MW: 35803.5 Da PI: 9.1067 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 21 | 5.7e-07 | 174 | 195 | 6 | 27 |
-SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27 Cr + t tC++G++C+F Hg+ OIT07624 174 CRWWGDTSTCRFGSKCRFVHGK 195 555556889***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MDFFYGKSND SQASKVRSLD VSPINTQNFI GRGRFYPGPK PRILDPYSSS DSSGSSSNRV 60 LSPLARYLHS SSPVPFASDS PERRSLVNSS SGSRSGSAAA GVFRSPLASI ENIEIPPAFR 120 TPVKVEEDVV VMDGILVEPK YSARAKSLPS TSDSGRLSSS TSGSENSSHK SDVCRWWGDT 180 STCRFGSKCR FVHGKEDLRP TAFANRNQSE ALSSRSYSSG SRAYGPRGRS VHHQVNSAVS 240 STESAAMATP TTVKKVVSIK DKEPPSSDSS PSSTTSTIAI SGTDWSPLDD NIEVSLPSSG 300 EKCPSREDVD AHIQTVLYGL SERKRLPVFV EFS |
Link Out ? help Back to Top | |
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Ensembl | OIT07624 |