PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT07621

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 327aa MW: 36685.9 Da PI: 4.8086

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT07621	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.1	3.6e-09	257	290	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+ +q+ +WF N+R ++ OIT07621 257 WPYPTEEEKNRLSEITGLDPKQINNWFINQRKRH 290 58*****************************885 PP
2	ELK	36	1.5e-12	210	231	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ L+rKYsgyL+sL++EF+ OIT07621 210 ELKETLMRKYSGYLSSLRKEFL 231 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MMDELSKLHS AIACSSNNNH VVGVLEHITG QQQEGPINNS SVDNNLEKAS LEMSDLIKAQ 60 IANHPLYPNL LSAYLQCRKV GAPQEMVSIL EKISKENHLI SSCHNTEIGT DPELDDFMES 120 YCAVLLKYKE ELSKPFDEAT TFLNNIESQL SSLCKENLTT TTTTTTSFNS NNNYLSDEAG 180 GTSDEDLGCG EMEAADSTQE SPANREGDNE LKETLMRKYS GYLSSLRKEF LKKRKKGKLP 240 KDARTALLDW WNTHYRWPYP TEEEKNRLSE ITGLDPKQIN NWFINQRKRH WRPSEDMKYA 300 LMEGVSSGSI AGSMYFDGAG GTESIGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	235	LRKEFLKKRK
2	232	236	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	1e-78	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT07621