PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07444
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 275aa    MW: 29837.1 Da    PI: 9.0072
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07444genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.73e-393595262
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
              k++a++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rkn+k+s
  OIT07444 35 KDQAINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNNKRS 95
              5799*****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
METTQWTQDI GIVKSMAAEI AAPNVTVEKK VRPVKDQAIN CPRCNSTNTK FCYYNNYSLT  60
QPRYFCKTCR RYWTEGGTLR NVPVGGGSRK NNKRSSSSSS SSLSQKLPDL NPNPSFSPQN  120
PNNKIIAGNS CQDLNPGFQT VSHDHHQFHG VPQFLELPKM DSSNNGNNHL GSTPISALEL  180
LRSGIASRGF TSFISSPAPP DLNTLYTLGF PFQELKPSAG SNDHAAAALS YSSGVQENGG  240
ARIMFPLGAD HHHQSKGQEN STAGFWNGML GGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.41e-51Dof family protein