PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT07110

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 647aa MW: 72339.5 Da PI: 5.0233

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT07110	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.7e-09	411	448	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + OIT07110 411 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 448 664459******************************88 PP
2	BELL	126.2	1.2e-40	273	344	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qe+q+k +kLls+l+e+d+rY+qy++q+q+v+ssF++vag g+akpYt+lAl++iSrhFrcL+dai++qi OIT07110 273 EKQEVQNKLTKLLSMLDEIDRRYRQYYHQMQIVVSSFDVVAGDGAAKPYTALALQTISRHFRCLRDAICDQI 344 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MATYFPSPNN QREAETFQYF RQSLPGSYSE ASNAQENMMV FMNYSSSGTY SDMLTGTSQQ 60 QNSCIDIPPV GASDSNNTSQ QEILSNLGGS RMEIHDFSAW RDSRNEMLYL SLGSNIPSGI 120 GISHVQSQNP NQGFTSFLNP ASSIPGEVSG GNVSFGDGDN SQPKQQRNAD YLPPDYPGSN 180 SDAMKGGYNS PYGTSSIGRN VPNSKYLKAA QYLLDEVVNV RKAIKEHNSK KESTKESRES 240 DGDSKNKSSD PPANGSSNPQ DSKNYQSELS QTEKQEVQNK LTKLLSMLDE IDRRYRQYYH 300 QMQIVVSSFD VVAGDGAAKP YTALALQTIS RHFRCLRDAI CDQIRVSRRS LGEQDASENS 360 KAVGISRLRY VDQHIRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL FEHFLHPYPK 420 DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE EAGDIEMDSN SPSEFSSRLA 480 TKDSKVEETE ELKHNETSEY EQYNSDQILE SKSNHVADVE MEGANNAETQ SQSGMENQTQ 540 KDEPRPAMDN CTLFQDTFVR GNDRFSDFGR FGSGNVLPNG VSLTLGLQQG EGSSLPMSIE 600 SHGSYVPLRV DEIYSTAPTT MVSETAEFNC LDSGNRQHPF WLLPSAT

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MATYFPSPNN QREAETFQYF RQSLPGSYSE ASNAQENMMV FMNYSSSGTY SDMLTGTSQQ  60
QNSCIDIPPV GASDSNNTSQ QEILSNLGGS RMEIHDFSAW RDSRNEMLYL SLGSNIPSGI  120
GISHVQSQNP NQGFTSFLNP ASSIPGEVSG GNVSFGDGDN SQPKQQRNAD YLPPDYPGSN  180
SDAMKGGYNS PYGTSSIGRN VPNSKYLKAA QYLLDEVVNV RKAIKEHNSK KESTKESRES  240
DGDSKNKSSD PPANGSSNPQ DSKNYQSELS QTEKQEVQNK LTKLLSMLDE IDRRYRQYYH  300
QMQIVVSSFD VVAGDGAAKP YTALALQTIS RHFRCLRDAI CDQIRVSRRS LGEQDASENS  360
KAVGISRLRY VDQHIRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL FEHFLHPYPK  420
DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE EAGDIEMDSN SPSEFSSRLA  480
TKDSKVEETE ELKHNETSEY EQYNSDQILE SKSNHVADVE MEGANNAETQ SQSGMENQTQ  540
KDEPRPAMDN CTLFQDTFVR GNDRFSDFGR FGSGNVLPNG VSLTLGLQQG EGSSLPMSIE  600
SHGSYVPLRV DEIYSTAPTT MVSETAEFNC LDSGNRQHPF WLLPSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-128	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT07110